Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
M1BP

Cell type

Cell type Class
Cell line
Cell type
Kc167
Source
e/se
Developmental Stage
dorsal closure stage

Attributes by original data submitter

Sample

source_name
Kc167
cell line
Kc167 cells
developmental stage
embryo
Sex
female
treatment
mock
chip antibody
M1BP

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIP-seq was performed as described previously (Bag et al., 2019). ChIP-seq library was performed as described previously (Bag et al., 2019, Matzat et al., 2012).

Sequencing Platform

instrument_model
Illumina HiSeq 2500

dm6

Number of total reads
10566854
Reads aligned (%)
81.8
Duplicates removed (%)
71.1
Number of peaks
3751 (qval < 1E-05)

dm3

Number of total reads
10566854
Reads aligned (%)
82.1
Duplicates removed (%)
69.3
Number of peaks
4039 (qval < 1E-05)

Base call quality data from DBCLS SRA